Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890919.1_cds_XP_016445619.1_40564
CDS Infomation

[gene=LOC107770800] [db_xref=GeneID:107770800] [protein=acyl-coenzyme A oxidase 4, peroxisomal-like] [protein_id=XP_016445619.1] [location=join(30225..30324,30614..30720,30914..30991,31068..31191,31448..31521,31610..31669,31803..31912,32137..32296,33470..33546,34326..34497,34574..34666,34828..34959)] [gbkey=CDS]
Sequence

ATGCAGAAAGAGGCAAAAAGCTCCTATTTTGATATGCCAGCATTGGATGTTTCTGTTGCA
TTTCCTCAAGCAACTCCAGCCTCCAACTTTCCTAAATGCACTTCAGACTATTATCAGTTT
GACGATCTGTTGACTCCTGAGGAGCAAGCCGTCAGAATGAAAGTGCGGGAATGCATGGAG
AAAGAGGTTGCTCCTGTAATGACGAAGTACTGGGAGAAGGCAGAGTTTCCTTTTGAAGTC
ATTCCGAAGCTTGGCGCTTTGCACATTGCTGGCGGCACTATCAAGGGGTATGGTTGTCCA
GGTTTCTCAATAACTGGAAGTGCCGTTTCTGCAGCAGAAGTTGCGCGAGTTGATGCAAGC
TGCTCTACATTCATTTTGGTGCATTCATCTTTAGCAATGCTCACCATTGGGCTATGTGGG
TCCGAAATGCAAAAGCAGAAGTACTTGCCGTCATTGGCTGAACTTAACTCTATAGCTTGT
TGGGGGCTAACTGAGCCGGACAATGGAAGTGATGCAAGTGCTTTAGGGACAACTGCCAGA
AAGGTTGAAGGAGGTTGGATCCTTGAAGGGCAAAAGCGTTGGATAGGAAATGCAACTTTT
GCAGATATACTGGTTATTTTTGCTAGAAATACATCGACAAACCAGATAAACGGTTTCATA
GTAAAGAAGGATGCTCCAGGATTGCAAGCTACTAAAATAGAAAACAAAATTGGACTACGG
ATGGTTCAAAATGGAGACATTCTCTTAAAGAAAGTTTTTGTCCCTGATGAGGATAGACTA
CCTGGTGTCAATTCTTTCCAGGATACGAACAAGGTGCTTGCTGTATCACGTGTCATGGTT
GCATGGCAGCCTATTGGCATTACAATGGGTGTTTATGATATGTGTCACAGGTACTTGAAG
GAGAGGAAGCAGTTTGGAGCTCCATTGGCCGCTTTCCAGATCAACCAACAGAAATTGGTT
CAGATGTTGGGCAACATTCAGGCAATGATTCTTGTCGGTTGGCGGCTTTGCAAGCTATAT
GAGAGTGGTAAAATGACTCCTGGCCATGCAAGCTTGGGGAAATCATGGATTACTTTGAGG
GCCAGAGAGACAGTTTCTCTTGGACGGGAATTACTAGGTGGCAATGGAATCTTGGCTGAG
TTTTTAGTTGCAAAGGCATTTTGCGATTTGGAGCCCATCTACACATATGAAGGTACTTAC
GATATCAACACGTTGGTAACAGGCAGAGAAATTACTGGTCTTGCCAGTTTCAAGCCTGCA
CCATTGAGGCAAAAGAGTCGCCTGTAA

Peptide Sequence

PEP ID

XP_016445619.1
PEP Infomation

PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Nicotiana tabacum]
Sequence

MQKEAKSSYFDMPALDVSVAFPQATPASNFPKCTSDYYQFDDLLTPEEQAVRMKVRECME
KEVAPVMTKYWEKAEFPFEVIPKLGALHIAGGTIKGYGCPGFSITGSAVSAAEVARVDAS
CSTFILVHSSLAMLTIGLCGSEMQKQKYLPSLAELNSIACWGLTEPDNGSDASALGTTAR
KVEGGWILEGQKRWIGNATFADILVIFARNTSTNQINGFIVKKDAPGLQATKIENKIGLR
MVQNGDILLKKVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGITMGVYDMCHRYLK
ERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGHASLGKSWITLR
ARETVSLGRELLGGNGILAEFLVAKAFCDLEPIYTYEGTYDINTLVTGREITGLASFKPA
PLRQKSRL

Transcript Sequence

Gene sequence data has not been registered.